Protein ZmHB54
ZmHB54 is a protein in the Homeobox family.
Information
TF Name: ZmHB54
Species: Maize
TF Family: Homeobox
Gene Name(Synonym): HB54
Uniprot ID: B4FIB8
Subgenome: 2

Protein ZmHB54

ZmHB54 is a protein in the Homeobox family.

Overview of domains present in v5 transcripts
PF00046PF02183
Zm00001eb101280_T003
Zm00001eb101280_T001
Zm00001eb101280_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d005951DAPseq no logo sequence fimo position
Zm00001d005951DAPseq no logo sequence fimo position
Zm00001d005951ChIPseq no logo sequence fimo position
Zm00001d005951PChIPseq no logo sequence fimo position

Interactions where ZmHB54 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmHB54 is the target  
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There are 201 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb101280_T003 from maize genome v5

Amino Acid Sequence
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MSWRECVRNEDLSPCACVFPDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKA
RLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIRELKAKLGDDEDAAASFTS
VKAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAGPVAGAAAANHGGVFFHGSFLKVEED
ETGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

MSWRECVRNEDLSPCACVFPDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKA
RLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIRELKAKLGDDEDAAASFTS
VKAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAGPVAGAAAANHGGVFFHGSFLKVEED
ETGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

MSWRECVRNEDLSPCACVFPDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKA
RLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIRELKAKLGDDEDAAASFTS
VKAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAGPVAGAAAANHGGVFFHGSFLKVEED
ETGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

MSWRECVRNEDLSPCACVFPDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKA
RLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIRELKAKLGDDEDAAASFTS
VKAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAGPVAGAAAANHGGVFFHGSFLKVEED
ETGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

MSWRECVRNEDLSPCACVFPDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKA
RLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIRELKAKLGDDEDAAASFTS
VKAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAGPVAGAAAANHGGVFFHGSFLKVEED
ETGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

MSWRECVRNEDLSPCACVFPDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKA
RLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIRELKAKLGDDEDAAASFTS
VKAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAGPVAGAAAANHGGVFFHGSFLKVEED
ETGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00046
PF02183
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Nucleotide Sequence
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ATTGTGGGAACTGCATGCTGAGAGC...

GRMZM2G041127_T01 from maize genome v3


Related TFome: pUT3191

Amino Acid Sequence
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MKRPRGATPSLSAMPNHQEDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKAR
LARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIRELKAKLGDDEDAAASFTSV
KAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAGPVAGAAAANHGGVFFHGSFLKVEEDE
TGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

Nucleotide Sequence
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TTCGGTGACGGTGACGCCAGCCCCG...

GRMZM2G041127_T02 from maize genome v3

Amino Acid Sequence
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MKRPRGATPSLSAMPNHQEDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKAR
LARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEVVLSITPYYICRRIV

Nucleotide Sequence
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TTCGGTGACGGTGACGCCAGCCCCG...

GRMZM2G041127_T03 from maize genome v3

Amino Acid Sequence
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MSWRECVRNEDLSPCACVFPDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKA
RLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIRELKAKLGDDEDAAASFTS
VKAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAGPVAGAAAANHGGVFFHGSFLKVEED
ETGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

Nucleotide Sequence
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ATTGTGGGAACTGCATGCTGAGAGC...

GRMZM2G041127_T04 from maize genome v3

Amino Acid Sequence
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MSWRECVRNEDLSPCACVFPDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKA
RLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIRELKAKLGDDEDAAASFTS
VKAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAGPVAGAAAANHGGVFFHGSFLKVEED
ETGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

Nucleotide Sequence
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GCATGCTGAGAGCAAACCCAGAAAG...

Zm00001d005951_T001 from maize genome v4

Amino Acid Sequence
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MKRPRGATPSLSAMPNHQEGIHCSGLLWGWVMSWRECVRNEDLSPCACVFPDDGYGVLGMEADVDVDVDEEMMAFGGGGG
GEKKRRLSAEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDA
LRRDKDALLAEIRELKAKLGDDEDAAASFTSVKAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTL
LVAPAGPVAGAAAANHGGVFFHGSFLKVEEDETGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

Nucleotide Sequence
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CCAGCACACGGTGACAAAAAGGAAA...

Zm00001d005951_T002 from maize genome v4

Amino Acid Sequence
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MKRPRGATPSLSAMPNHQEDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKAR
LARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIRELKAKLGDDEDAAASFTSV
KAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAGPVAGAAAANHGGVFFHGSFLKVEEDE
TGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

Nucleotide Sequence
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GGGGAGAGTGGGAGACGGTCGGAGA...

Zm00001d005951_T003 from maize genome v4

Amino Acid Sequence
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MEADVDVDVDEEMMAFGGGGGGEKKRRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIREL
KAKLGDDEDAAASFTSVKAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAAANHGGVFFH
GSFLKVEEDETGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

Nucleotide Sequence
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GATGACGGCTACGGCGTGCTCGGGA...

Zm00001eb101280_T001 from maize genome v5

Amino Acid Sequence
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MSWRECVRNEDLSPCACVFPDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKA
RLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIRELKAKLGDDEDAAASFTS
VKAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAGPVAGAAAANHGGVFFHGSFLKVEED
ETGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

Nucleotide Sequence
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CCAGCACACGGTGACAAAAAGGAAA...

Zm00001eb101280_T002 from maize genome v5

Amino Acid Sequence
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MKRPRGATPSLSAMPNHQEDDGYGVLGMEADVDVDVDEEMMAFGGGGGGEKKRRLSAEQVRALERSFEVENKLEPERKAR
LARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRRSYDALRLDHDALRRDKDALLAEIRELKAKLGDDEDAAASFTSV
KAEPAASDGPAPAGVGSSEISDSSAVLNDADPPVAEAPAPAPEVQGTLLVAPAGPVAGAAAANHGGVFFHGSFLKVEEDE
TGLLDDDGPCGGFFAVEQPPAMAWWNEPAEHWN

Nucleotide Sequence
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CCAGCACACGGTGACAAAAAGGAAA...


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